Lin Fei-fan, Han Ya-li. Bioinformatic Analysis of the Main Characteristics and Structure of the Gene Encoding CYP2E1 Protein[J]. 2015, 32(1): 16-19.DOI: 10.3969/j.issn.1007-7162.2015.01.004.
The nucleotide and amino acid sequences of CYP2E1 protein (GenBank accession number: NC000010.11 and NM000773.3) from human being have been analyzed and predicted by bioinformatics in the following aspects: physicochemical properties
hydrophilicity and hydrophobicity
the signal peptide
transmembrane topological structure
subcellular localization
protein secondary structure and tertiary structure
the enzyme active center structure
and the composition of homologous protein and phylogenetic relationship of human being and other 6 species. The results show that the CYP2E1 gene encodes a 493 amino acid polypeptides with the estimated relative mole
cular weight 172 386.6
the theoretical PI of 7.04 and the structural formula of C
6778
H
10986
N
2074
O
2429
S
374
;. It is also found that CYP2E1 is a transmembrane protein with hydrophobicity and relatively unstable. There are 6 β fold
6 α-helix
6 transmembrane regions and 32 angles in its secondary structure
and It's active center was composed of Asn
202
residues
Ser
298
residues
Phe
205
residues and iron porphyrin ring. The distance of its heme and substrate catalytic sites is 0.3-0.6 nm .